Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Tpm1P58771 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.17□□□□□ -0.14
Tpm1P58771 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Tpm1P58771 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tpm1P58771 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tpm1P58771 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tpm1P58771 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.17□□□□□ -0.14
Tpm1P58771 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.17□□□□□ -0.14
Tpm1P58771 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Gm44124-201ENSMUST00000204159 472 ntBASIC14.17□□□□□ -0.14
Tpm1P58771 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.17□□□□□ -0.14
Tpm1P58771 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.17□□□□□ -0.14
Tpm1P58771 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.17□□□□□ -0.14
Tpm1P58771 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tpm1P58771 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tpm1P58771 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.17□□□□□ -0.14
Tpm1P58771 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.17□□□□□ -0.14
Tpm1P58771 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm1P58771 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tpm1P58771 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tpm1P58771 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.16□□□□□ -0.14
Tpm1P58771 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.16□□□□□ -0.14
Tpm1P58771 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Gm21854-201ENSMUST00000179901 471 ntBASIC14.16□□□□□ -0.14
Tpm1P58771 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Gm38223-201ENSMUST00000194484 695 ntBASIC14.16□□□□□ -0.14
Tpm1P58771 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.16□□□□□ -0.14
Tpm1P58771 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.16□□□□□ -0.14
Tpm1P58771 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Gm9797-201ENSMUST00000052902 613 ntBASIC14.16□□□□□ -0.14
Tpm1P58771 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.16□□□□□ -0.14
Tpm1P58771 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tpm1P58771 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.16□□□□□ -0.14
Tpm1P58771 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tpm1P58771 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Tpm1P58771 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.16□□□□□ -0.14
Tpm1P58771 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm1P58771 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.15□□□□□ -0.14
Tpm1P58771 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.15□□□□□ -0.14
Tpm1P58771 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Tpm1P58771 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tpm1P58771 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms