Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.6□□□□□ -0.55
Cdh11P55288 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdh11P55288 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdh11P55288 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdh11P55288 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.6□□□□□ -0.55
Cdh11P55288 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
Cdh11P55288 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdh11P55288 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdh11P55288 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cdh11P55288 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Gm27847-201ENSMUST00000183711 107 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Gm27375-201ENSMUST00000183799 107 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cdh11P55288 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdh11P55288 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdh11P55288 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdh11P55288 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdh11P55288 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdh11P55288 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.6□□□□□ -0.55
Cdh11P55288 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Cdh11P55288 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh11P55288 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdh11P55288 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cdh11P55288 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Cdh11P55288 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdh11P55288 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.59□□□□□ -0.55
Cdh11P55288 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Gm8652-201ENSMUST00000181363 964 ntBASIC11.59□□□□□ -0.55
Cdh11P55288 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.59□□□□□ -0.55
Cdh11P55288 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdh11P55288 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.59□□□□□ -0.55
Cdh11P55288 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.59□□□□□ -0.55
Cdh11P55288 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.59□□□□□ -0.55
Cdh11P55288 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Gm24447-201ENSMUST00000083977 338 ntBASIC11.59□□□□□ -0.55
Cdh11P55288 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.59□□□□□ -0.55
Cdh11P55288 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cdh11P55288 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms