Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nub1P54729 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nub1P54729 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.71□□□□□ -0.21
Nub1P54729 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Nub1P54729 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.71□□□□□ -0.21
Nub1P54729 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.71□□□□□ -0.21
Nub1P54729 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.71□□□□□ -0.21
Nub1P54729 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Snora73a-201ENSMUST00000082453 205 ntBASIC13.71□□□□□ -0.21
Nub1P54729 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Nub1P54729 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.71□□□□□ -0.21
Nub1P54729 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.71□□□□□ -0.21
Nub1P54729 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.71□□□□□ -0.21
Nub1P54729 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nub1P54729 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.71□□□□□ -0.21
Nub1P54729 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nub1P54729 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Nub1P54729 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nub1P54729 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nub1P54729 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.71□□□□□ -0.22
Nub1P54729 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nub1P54729 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nub1P54729 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nub1P54729 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nub1P54729 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nub1P54729 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Nub1P54729 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.71□□□□□ -0.22
Nub1P54729 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.71□□□□□ -0.22
Nub1P54729 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.7□□□□□ -0.22
Nub1P54729 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nub1P54729 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Nub1P54729 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.7□□□□□ -0.22
Nub1P54729 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nub1P54729 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Gm25261-201ENSMUST00000157416 134 ntBASIC13.7□□□□□ -0.22
Nub1P54729 Gm8099-201ENSMUST00000200510 742 ntBASIC13.7□□□□□ -0.22
Nub1P54729 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.7□□□□□ -0.22
Nub1P54729 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nub1P54729 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.7□□□□□ -0.22
Nub1P54729 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.7□□□□□ -0.22
Nub1P54729 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nub1P54729 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Nub1P54729 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.7□□□□□ -0.22
Nub1P54729 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.7□□□□□ -0.22
Nub1P54729 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.7□□□□□ -0.22
Nub1P54729 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.7□□□□□ -0.22
Nub1P54729 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Nub1P54729 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nub1P54729 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Nub1P54729 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nub1P54729 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms