Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.71□□□□□ -0.38
Fdft1P53798 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Fdft1P53798 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Fdft1P53798 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.71□□□□□ -0.38
Fdft1P53798 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
Fdft1P53798 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
Fdft1P53798 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fdft1P53798 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Fdft1P53798 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Fdft1P53798 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Fdft1P53798 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.7□□□□□ -0.38
Fdft1P53798 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Fdft1P53798 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Fdft1P53798 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Gm8652-201ENSMUST00000181363 964 ntBASIC12.7□□□□□ -0.38
Fdft1P53798 Gm37922-201ENSMUST00000195596 455 ntBASIC12.7□□□□□ -0.38
Fdft1P53798 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.7□□□□□ -0.38
Fdft1P53798 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.7□□□□□ -0.38
Fdft1P53798 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Fdft1P53798 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Fdft1P53798 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.7□□□□□ -0.38
Fdft1P53798 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.7□□□□□ -0.38
Fdft1P53798 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Fdft1P53798 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fdft1P53798 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Fdft1P53798 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Fdft1P53798 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.69□□□□□ -0.38
Fdft1P53798 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Gm13369-201ENSMUST00000119442 987 ntBASIC12.69□□□□□ -0.38
Fdft1P53798 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Gm7653-201ENSMUST00000214567 508 ntBASIC12.69□□□□□ -0.38
Fdft1P53798 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.69□□□□□ -0.38
Fdft1P53798 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.69□□□□□ -0.38
Fdft1P53798 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.69□□□□□ -0.38
Fdft1P53798 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.69□□□□□ -0.38
Fdft1P53798 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms