Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.53□□□□□ -0.72
Nkx2-1P50220 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.53□□□□□ -0.72
Nkx2-1P50220 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Mir8102-201ENSMUST00000184148 139 ntBASIC10.53□□□□□ -0.72
Nkx2-1P50220 Gm19184-201ENSMUST00000196798 928 ntBASIC10.53□□□□□ -0.72
Nkx2-1P50220 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx2-1P50220 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx2-1P50220 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx2-1P50220 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx2-1P50220 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx2-1P50220 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx2-1P50220 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx2-1P50220 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.52□□□□□ -0.73
Nkx2-1P50220 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Gm29608-201ENSMUST00000190444 463 ntBASIC10.52□□□□□ -0.73
Nkx2-1P50220 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.52□□□□□ -0.73
Nkx2-1P50220 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.52□□□□□ -0.73
Nkx2-1P50220 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkx2-1P50220 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms