Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Brca1P48754 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Brca1P48754 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Brca1P48754 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Brca1P48754 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.99□□□□□ -0.17
Brca1P48754 Gm7722-201ENSMUST00000120646 741 ntBASIC13.99□□□□□ -0.17
Brca1P48754 Gm14247-201ENSMUST00000120950 237 ntBASIC13.99□□□□□ -0.17
Brca1P48754 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.99□□□□□ -0.17
Brca1P48754 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.99□□□□□ -0.17
Brca1P48754 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Brca1P48754 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.99□□□□□ -0.17
Brca1P48754 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Gm26448-201ENSMUST00000082446 203 ntBASIC13.99□□□□□ -0.17
Brca1P48754 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Brca1P48754 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.98□□□□□ -0.17
Brca1P48754 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Brca1P48754 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.98□□□□□ -0.17
Brca1P48754 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.98□□□□□ -0.17
Brca1P48754 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.98□□□□□ -0.17
Brca1P48754 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Brca1P48754 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.98□□□□□ -0.17
Brca1P48754 Gm5621-201ENSMUST00000187303 640 ntBASIC13.98□□□□□ -0.17
Brca1P48754 Gm44158-201ENSMUST00000203881 505 ntBASIC13.98□□□□□ -0.17
Brca1P48754 Gm3619-201ENSMUST00000219947 775 ntBASIC13.98□□□□□ -0.17
Brca1P48754 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.98□□□□□ -0.17
Brca1P48754 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Brca1P48754 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Brca1P48754 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Brca1P48754 Mir483-201ENSMUST00000093631 73 ntBASIC13.98□□□□□ -0.17
Brca1P48754 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brca1P48754 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.98□□□□□ -0.17
Brca1P48754 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.98□□□□□ -0.17
Brca1P48754 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Brca1P48754 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Brca1P48754 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Gm12516-201ENSMUST00000120819 385 ntBASIC13.97□□□□□ -0.17
Brca1P48754 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Gm43186-201ENSMUST00000198130 824 ntBASIC13.97□□□□□ -0.17
Brca1P48754 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Gm17931-201ENSMUST00000208132 634 ntBASIC13.97□□□□□ -0.17
Brca1P48754 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.97□□□□□ -0.17
Brca1P48754 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Brca1P48754 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Brca1P48754 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.97□□□□□ -0.17
Brca1P48754 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms