Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
GdnfP48540 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.16□□□□□ -0.62
GdnfP48540 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.16□□□□□ -0.62
GdnfP48540 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.16□□□□□ -0.62
GdnfP48540 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.16□□□□□ -0.62
GdnfP48540 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.16□□□□□ -0.62
GdnfP48540 Gm18307-201ENSMUST00000206864 949 ntBASIC11.16□□□□□ -0.62
GdnfP48540 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
GdnfP48540 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
GdnfP48540 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
GdnfP48540 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.16□□□□□ -0.62
GdnfP48540 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.16□□□□□ -0.62
GdnfP48540 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
GdnfP48540 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
GdnfP48540 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
GdnfP48540 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
GdnfP48540 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.16□□□□□ -0.62
GdnfP48540 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.16□□□□□ -0.62
GdnfP48540 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
GdnfP48540 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
GdnfP48540 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.15□□□□□ -0.62
GdnfP48540 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Gm14928-201ENSMUST00000120198 477 ntBASIC11.15□□□□□ -0.62
GdnfP48540 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.15□□□□□ -0.62
GdnfP48540 Gm23984-201ENSMUST00000157139 203 ntBASIC11.15□□□□□ -0.62
GdnfP48540 Mir7654-201ENSMUST00000185082 70 ntBASIC11.15□□□□□ -0.62
GdnfP48540 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.15□□□□□ -0.62
GdnfP48540 Gm45668-201ENSMUST00000211271 493 ntBASIC11.15□□□□□ -0.62
GdnfP48540 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.15□□□□□ -0.62
GdnfP48540 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Gm17872-201ENSMUST00000222550 532 ntBASIC11.15□□□□□ -0.62
GdnfP48540 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.15□□□□□ -0.62
GdnfP48540 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
GdnfP48540 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.15□□□□□ -0.62
GdnfP48540 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.15□□□□□ -0.62
GdnfP48540 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
GdnfP48540 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
GdnfP48540 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.15□□□□□ -0.63
GdnfP48540 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
GdnfP48540 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
GdnfP48540 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
GdnfP48540 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
GdnfP48540 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
GdnfP48540 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
GdnfP48540 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
GdnfP48540 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
GdnfP48540 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
GdnfP48540 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
GdnfP48540 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
GdnfP48540 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
GdnfP48540 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
GdnfP48540 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
GdnfP48540 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
GdnfP48540 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms