Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.5□□□□□ -0.57
Rfx3P48381 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.5□□□□□ -0.57
Rfx3P48381 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.5□□□□□ -0.57
Rfx3P48381 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.49□□□□□ -0.57
Rfx3P48381 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rfx3P48381 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.49□□□□□ -0.57
Rfx3P48381 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.49□□□□□ -0.57
Rfx3P48381 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.49□□□□□ -0.57
Rfx3P48381 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rfx3P48381 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rfx3P48381 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.49□□□□□ -0.57
Rfx3P48381 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.49□□□□□ -0.57
Rfx3P48381 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.49□□□□□ -0.57
Rfx3P48381 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rfx3P48381 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.49□□□□□ -0.57
Rfx3P48381 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.49□□□□□ -0.57
Rfx3P48381 Gm44069-201ENSMUST00000204898 506 ntBASIC11.49□□□□□ -0.57
Rfx3P48381 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.49□□□□□ -0.57
Rfx3P48381 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Rfx3P48381 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.49□□□□□ -0.57
Rfx3P48381 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.49□□□□□ -0.57
Rfx3P48381 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.49□□□□□ -0.57
Rfx3P48381 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.49□□□□□ -0.57
Rfx3P48381 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rfx3P48381 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.49□□□□□ -0.57
Rfx3P48381 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.49□□□□□ -0.57
Rfx3P48381 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfx3P48381 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Rfx3P48381 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.48□□□□□ -0.57
Rfx3P48381 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.48□□□□□ -0.57
Rfx3P48381 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Rfx3P48381 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rfx3P48381 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.48□□□□□ -0.57
Rfx3P48381 Gm14928-201ENSMUST00000120198 477 ntBASIC11.48□□□□□ -0.57
Rfx3P48381 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.48□□□□□ -0.57
Rfx3P48381 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.48□□□□□ -0.57
Rfx3P48381 Gm23984-201ENSMUST00000157139 203 ntBASIC11.48□□□□□ -0.57
Rfx3P48381 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Gm38671-201ENSMUST00000200573 130 ntBASIC11.48□□□□□ -0.57
Rfx3P48381 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.48□□□□□ -0.57
Rfx3P48381 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.48□□□□□ -0.57
Rfx3P48381 Gm6458-201ENSMUST00000211573 635 ntBASIC11.48□□□□□ -0.57
Rfx3P48381 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.48□□□□□ -0.57
Rfx3P48381 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.48□□□□□ -0.57
Rfx3P48381 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.48□□□□□ -0.57
Rfx3P48381 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rfx3P48381 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.48□□□□□ -0.57
Rfx3P48381 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.48□□□□□ -0.57
Rfx3P48381 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Rfx3P48381 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms