Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Xcl1P47993 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC8.17□□□□□ -1.1
Xcl1P47993 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Xcl1P47993 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Xcl1P47993 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Xcl1P47993 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Xcl1P47993 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Xcl1P47993 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Xcl1P47993 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Xcl1P47993 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Xcl1P47993 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Xcl1P47993 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC8.17□□□□□ -1.1
Xcl1P47993 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC8.17□□□□□ -1.1
Xcl1P47993 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Gm19972-201ENSMUST00000218180 5664 ntBASIC8.16□□□□□ -1.1
Xcl1P47993 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Gm10013-201ENSMUST00000106074 672 ntBASIC8.16□□□□□ -1.1
Xcl1P47993 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Xcl1P47993 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Gm11780-201ENSMUST00000136880 516 ntBASIC8.16□□□□□ -1.1
Xcl1P47993 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 Ighv1-51-201ENSMUST00000192903 354 ntBASIC8.16□□□□□ -1.1
Xcl1P47993 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC8.16□□□□□ -1.1
Xcl1P47993 Gm37584-201ENSMUST00000193595 1290 ntBASIC8.16□□□□□ -1.1
Xcl1P47993 Gm37714-201ENSMUST00000194742 342 ntBASIC8.16□□□□□ -1.1
Xcl1P47993 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC8.16□□□□□ -1.1
Xcl1P47993 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC8.16□□□□□ -1.1
Xcl1P47993 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.16□□□□□ -1.1
Xcl1P47993 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Xcl1P47993 Arhgef33-211ENSMUST00000225658 473 ntBASIC8.16□□□□□ -1.1
Xcl1P47993 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Gm7461-201ENSMUST00000058918 827 ntBASIC8.16□□□□□ -1.1
Xcl1P47993 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Xcl1P47993 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Xcl1P47993 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC8.16□□□□□ -1.1
Xcl1P47993 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Gm2420-201ENSMUST00000119864 2149 ntBASIC8.15□□□□□ -1.1
Xcl1P47993 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC8.15□□□□□ -1.1
Xcl1P47993 Gm37613-201ENSMUST00000195677 3580 ntBASIC8.15□□□□□ -1.1
Xcl1P47993 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Xcl1P47993 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC8.15□□□□□ -1.1
Xcl1P47993 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Xcl1P47993 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms