Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 AC154184.3-201ENSMUST00000225620 1090 ntBASIC15.23■□□□□ 0.03
Nedd4P46935 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC15.23■□□□□ 0.03
Nedd4P46935 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.23■□□□□ 0.03
Nedd4P46935 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nedd4P46935 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Nedd4P46935 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd4P46935 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.22■□□□□ 0.03
Nedd4P46935 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nedd4P46935 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.22■□□□□ 0.03
Nedd4P46935 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.22■□□□□ 0.03
Nedd4P46935 Gm12899-201ENSMUST00000120565 551 ntBASIC15.22■□□□□ 0.03
Nedd4P46935 Gm23218-201ENSMUST00000158124 276 ntBASIC15.22■□□□□ 0.03
Nedd4P46935 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.22■□□□□ 0.03
Nedd4P46935 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC15.22■□□□□ 0.03
Nedd4P46935 Gm42937-201ENSMUST00000197360 752 ntBASIC15.22■□□□□ 0.03
Nedd4P46935 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC15.22■□□□□ 0.03
Nedd4P46935 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Nedd4P46935 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Nedd4P46935 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Nedd4P46935 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.22■□□□□ 0.03
Nedd4P46935 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nedd4P46935 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nedd4P46935 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Nedd4P46935 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Gm24891-201ENSMUST00000104391 136 ntBASIC15.21■□□□□ 0.03
Nedd4P46935 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.21■□□□□ 0.03
Nedd4P46935 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Nedd4P46935 Gm12628-201ENSMUST00000122193 382 ntBASIC15.21■□□□□ 0.03
Nedd4P46935 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.21■□□□□ 0.03
Nedd4P46935 Mir7221-201ENSMUST00000184009 72 ntBASIC15.21■□□□□ 0.03
Nedd4P46935 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.21■□□□□ 0.03
Nedd4P46935 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Gm2517-201ENSMUST00000215651 348 ntBASIC15.21■□□□□ 0.03
Nedd4P46935 Gm6867-201ENSMUST00000219165 425 ntBASIC15.21■□□□□ 0.03
Nedd4P46935 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.21■□□□□ 0.03
Nedd4P46935 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.21■□□□□ 0.03
Nedd4P46935 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nedd4P46935 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nedd4P46935 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Nedd4P46935 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Nedd4P46935 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nedd4P46935 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nedd4P46935 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nedd4P46935 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nedd4P46935 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nedd4P46935 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nedd4P46935 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nedd4P46935 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nedd4P46935 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nedd4P46935 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nedd4P46935 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nedd4P46935 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nedd4P46935 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Nedd4P46935 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.2■□□□□ 0.02
Nedd4P46935 Gm11246-201ENSMUST00000120880 345 ntBASIC15.2■□□□□ 0.02
Nedd4P46935 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Nedd4P46935 Gm23085-201ENSMUST00000157849 293 ntBASIC15.2■□□□□ 0.02
Nedd4P46935 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.2■□□□□ 0.02
Nedd4P46935 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nedd4P46935 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.2■□□□□ 0.02
Nedd4P46935 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nedd4P46935 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.2■□□□□ 0.02
Nedd4P46935 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.2■□□□□ 0.02
Nedd4P46935 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nedd4P46935 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms