Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox18P43680 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 Gm44975-201ENSMUST00000207435 1390 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sox18P43680 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Gm13875-201ENSMUST00000120162 282 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Gm12372-201ENSMUST00000121654 768 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox18P43680 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.3□□□□□ -0.44
Sox18P43680 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox18P43680 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox18P43680 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox18P43680 Gm37751-201ENSMUST00000192440 1198 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.3□□□□□ -0.44
Sox18P43680 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.3□□□□□ -0.44
Sox18P43680 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Gm8285-201ENSMUST00000208293 759 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Gm7848-201ENSMUST00000210739 718 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Gm18730-201ENSMUST00000218038 343 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Sox18P43680 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox18P43680 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox18P43680 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox18P43680 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox18P43680 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sox18P43680 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox18P43680 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox18P43680 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox18P43680 Gm38262-201ENSMUST00000194760 1382 ntBASIC12.3□□□□□ -0.44
Sox18P43680 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
Sox18P43680 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox18P43680 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.29□□□□□ -0.44
Sox18P43680 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox18P43680 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox18P43680 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox18P43680 Gm4732-201ENSMUST00000118778 473 ntBASIC12.29□□□□□ -0.44
Sox18P43680 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox18P43680 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox18P43680 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox18P43680 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox18P43680 Gm18734-201ENSMUST00000172937 808 ntBASIC12.29□□□□□ -0.44
Sox18P43680 Mir6958-201ENSMUST00000184207 73 ntBASIC12.29□□□□□ -0.44
Sox18P43680 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox18P43680 Gm37857-201ENSMUST00000191784 1199 ntBASIC12.29□□□□□ -0.44
Sox18P43680 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms