Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Msh2P43247 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Msh2P43247 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.1□□□□□ -0.31
Msh2P43247 Gm13612-201ENSMUST00000119276 390 ntBASIC13.1□□□□□ -0.31
Msh2P43247 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.1□□□□□ -0.31
Msh2P43247 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.1□□□□□ -0.31
Msh2P43247 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Gm5035-201ENSMUST00000215581 927 ntBASIC13.1□□□□□ -0.31
Msh2P43247 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.1□□□□□ -0.31
Msh2P43247 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Msh2P43247 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msh2P43247 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Msh2P43247 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.09□□□□□ -0.31
Msh2P43247 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.09□□□□□ -0.31
Msh2P43247 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Msh2P43247 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.09□□□□□ -0.31
Msh2P43247 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.09□□□□□ -0.31
Msh2P43247 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.09□□□□□ -0.31
Msh2P43247 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Msh2P43247 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.09□□□□□ -0.31
Msh2P43247 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.09□□□□□ -0.31
Msh2P43247 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.09□□□□□ -0.31
Msh2P43247 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.09□□□□□ -0.31
Msh2P43247 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.09□□□□□ -0.31
Msh2P43247 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.09□□□□□ -0.31
Msh2P43247 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msh2P43247 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.08□□□□□ -0.31
Msh2P43247 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Msh2P43247 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Msh2P43247 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Msh2P43247 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.08□□□□□ -0.32
Msh2P43247 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Msh2P43247 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.08□□□□□ -0.32
Msh2P43247 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.08□□□□□ -0.32
Msh2P43247 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.08□□□□□ -0.32
Msh2P43247 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msh2P43247 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms