Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdx2P43241 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdx2P43241 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdx2P43241 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.05□□□□□ -0.48
Cdx2P43241 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdx2P43241 Gm45770-201ENSMUST00000212105 616 ntBASIC12.05□□□□□ -0.48
Cdx2P43241 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdx2P43241 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.05□□□□□ -0.48
Cdx2P43241 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Acot6-202ENSMUST00000222921 3622 ntBASIC12.05□□□□□ -0.48
Cdx2P43241 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdx2P43241 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdx2P43241 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.04□□□□□ -0.48
Cdx2P43241 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdx2P43241 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdx2P43241 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cdx2P43241 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdx2P43241 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.04□□□□□ -0.48
Cdx2P43241 Gm28071-201ENSMUST00000190355 478 ntBASIC12.04□□□□□ -0.48
Cdx2P43241 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdx2P43241 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.04□□□□□ -0.48
Cdx2P43241 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdx2P43241 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx2P43241 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cdx2P43241 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdx2P43241 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.03□□□□□ -0.48
Cdx2P43241 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Cdx2P43241 Gm13408-201ENSMUST00000119822 798 ntBASIC12.03□□□□□ -0.48
Cdx2P43241 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Gm11450-201ENSMUST00000121144 333 ntBASIC12.03□□□□□ -0.48
Cdx2P43241 Gm13935-201ENSMUST00000121859 798 ntBASIC12.03□□□□□ -0.48
Cdx2P43241 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdx2P43241 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdx2P43241 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms