Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-2P42586 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx2-2P42586 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-2P42586 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-2P42586 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Nkx2-2P42586 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-2P42586 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Nkx2-2P42586 Daam2-202ENSMUST00000224595 1926 ntBASIC11.64□□□□□ -0.55
Nkx2-2P42586 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-2P42586 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-2P42586 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx2-2P42586 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.63□□□□□ -0.55
Nkx2-2P42586 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.63□□□□□ -0.55
Nkx2-2P42586 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm23931-201ENSMUST00000103842 109 ntBASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm24231-201ENSMUST00000104315 133 ntBASIC11.63□□□□□ -0.55
Nkx2-2P42586 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm24548-201ENSMUST00000158650 108 ntBASIC11.63□□□□□ -0.55
Nkx2-2P42586 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm45930-201ENSMUST00000221330 292 ntBASIC11.63□□□□□ -0.55
Nkx2-2P42586 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.63□□□□□ -0.55
Nkx2-2P42586 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx2-2P42586 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.62□□□□□ -0.55
Nkx2-2P42586 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Rmrp-201ENSMUST00000157463 271 ntBASIC11.62□□□□□ -0.55
Nkx2-2P42586 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Gm8018-201ENSMUST00000173536 789 ntBASIC11.62□□□□□ -0.55
Nkx2-2P42586 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Nkx2-2P42586 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Gm5370-201ENSMUST00000187187 574 ntBASIC11.62□□□□□ -0.55
Nkx2-2P42586 Gm18062-201ENSMUST00000208020 547 ntBASIC11.62□□□□□ -0.55
Nkx2-2P42586 Gm18055-201ENSMUST00000208254 547 ntBASIC11.62□□□□□ -0.55
Nkx2-2P42586 Gm5904-201ENSMUST00000210286 865 ntBASIC11.62□□□□□ -0.55
Nkx2-2P42586 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.62□□□□□ -0.55
Nkx2-2P42586 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.62□□□□□ -0.55
Nkx2-2P42586 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Nkx2-2P42586 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-2P42586 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms