Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC8.55□□□□□ -1.04
Rpl28P41105 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC8.55□□□□□ -1.04
Rpl28P41105 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 AC132863.2-201ENSMUST00000226643 799 ntBASIC8.55□□□□□ -1.04
Rpl28P41105 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Gm9797-201ENSMUST00000052902 613 ntBASIC8.55□□□□□ -1.04
Rpl28P41105 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC8.55□□□□□ -1.04
Rpl28P41105 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Gm43721-201ENSMUST00000199677 2313 ntBASIC8.55□□□□□ -1.04
Rpl28P41105 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Rpl28P41105 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Map1b-203ENSMUST00000223725 2669 ntBASIC8.54□□□□□ -1.04
Rpl28P41105 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 AC160410.1-201ENSMUST00000219298 1972 ntBASIC8.54□□□□□ -1.04
Rpl28P41105 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC8.54□□□□□ -1.04
Rpl28P41105 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC8.54□□□□□ -1.04
Rpl28P41105 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Gm14719-201ENSMUST00000121891 340 ntBASIC8.54□□□□□ -1.04
Rpl28P41105 Gm25927-201ENSMUST00000175058 117 ntBASIC8.54□□□□□ -1.04
Rpl28P41105 Gm28760-201ENSMUST00000185995 736 ntBASIC8.54□□□□□ -1.04
Rpl28P41105 Gm7063-201ENSMUST00000186840 981 ntBASIC8.54□□□□□ -1.04
Rpl28P41105 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 AC155258.1-201ENSMUST00000219303 253 ntBASIC8.54□□□□□ -1.04
Rpl28P41105 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 AC154305.4-201ENSMUST00000224520 614 ntBASIC8.54□□□□□ -1.04
Rpl28P41105 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Rpl28P41105 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Arhgef3-204ENSMUST00000225949 3198 ntBASIC8.54□□□□□ -1.04
Rpl28P41105 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Rpl28P41105 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl28P41105 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rpl28P41105 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC8.53□□□□□ -1.04
Rpl28P41105 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms