Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HmgclP38060 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HmgclP38060 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.52□□□□□ -0.41
HmgclP38060 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
HmgclP38060 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HmgclP38060 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HmgclP38060 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
HmgclP38060 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HmgclP38060 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HmgclP38060 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.52□□□□□ -0.41
HmgclP38060 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HmgclP38060 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HmgclP38060 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HmgclP38060 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HmgclP38060 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HmgclP38060 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
HmgclP38060 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.51□□□□□ -0.41
HmgclP38060 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
HmgclP38060 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.51□□□□□ -0.41
HmgclP38060 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Gm11964-201ENSMUST00000120982 444 ntBASIC12.51□□□□□ -0.41
HmgclP38060 Gm14760-201ENSMUST00000121831 999 ntBASIC12.51□□□□□ -0.41
HmgclP38060 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.51□□□□□ -0.41
HmgclP38060 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.51□□□□□ -0.41
HmgclP38060 Gm8738-201ENSMUST00000172606 329 ntBASIC12.51□□□□□ -0.41
HmgclP38060 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.51□□□□□ -0.41
HmgclP38060 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.51□□□□□ -0.41
HmgclP38060 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HmgclP38060 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.51□□□□□ -0.41
HmgclP38060 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Gm5781-201ENSMUST00000219792 443 ntBASIC12.51□□□□□ -0.41
HmgclP38060 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.51□□□□□ -0.41
HmgclP38060 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.51□□□□□ -0.41
HmgclP38060 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.51□□□□□ -0.41
HmgclP38060 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.51□□□□□ -0.41
HmgclP38060 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
HmgclP38060 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.51□□□□□ -0.41
HmgclP38060 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.51□□□□□ -0.41
HmgclP38060 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
HmgclP38060 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HmgclP38060 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HmgclP38060 Daam2-202ENSMUST00000224595 1926 ntBASIC12.5□□□□□ -0.41
HmgclP38060 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.5□□□□□ -0.41
HmgclP38060 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HmgclP38060 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HmgclP38060 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Gm23931-201ENSMUST00000103842 109 ntBASIC12.5□□□□□ -0.41
HmgclP38060 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HmgclP38060 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.5□□□□□ -0.41
HmgclP38060 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.5□□□□□ -0.41
HmgclP38060 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.5□□□□□ -0.41
HmgclP38060 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.5□□□□□ -0.41
HmgclP38060 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
HmgclP38060 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Gm18062-201ENSMUST00000208020 547 ntBASIC12.5□□□□□ -0.41
HmgclP38060 Gm18055-201ENSMUST00000208254 547 ntBASIC12.5□□□□□ -0.41
HmgclP38060 Gm25857-201ENSMUST00000082788 129 ntBASIC12.5□□□□□ -0.41
HmgclP38060 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.5□□□□□ -0.41
HmgclP38060 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.5□□□□□ -0.41
HmgclP38060 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.5□□□□□ -0.41
HmgclP38060 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms