Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.75□□□□□ -0.53
Foxa1P35582 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Gm8062-201ENSMUST00000139696 444 ntBASIC11.75□□□□□ -0.53
Foxa1P35582 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Foxa1P35582 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Foxa1P35582 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.75□□□□□ -0.53
Foxa1P35582 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.75□□□□□ -0.53
Foxa1P35582 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.75□□□□□ -0.53
Foxa1P35582 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Foxa1P35582 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.75□□□□□ -0.53
Foxa1P35582 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.75□□□□□ -0.53
Foxa1P35582 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Foxa1P35582 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.75□□□□□ -0.53
Foxa1P35582 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Foxa1P35582 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Foxa1P35582 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Foxa1P35582 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Foxa1P35582 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Foxa1P35582 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Foxa1P35582 Gm12742-201ENSMUST00000117326 410 ntBASIC11.74□□□□□ -0.53
Foxa1P35582 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.74□□□□□ -0.53
Foxa1P35582 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.74□□□□□ -0.53
Foxa1P35582 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Foxa1P35582 Gm19184-201ENSMUST00000196798 928 ntBASIC11.74□□□□□ -0.53
Foxa1P35582 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.74□□□□□ -0.53
Foxa1P35582 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.74□□□□□ -0.53
Foxa1P35582 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.74□□□□□ -0.53
Foxa1P35582 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Foxa1P35582 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Foxa1P35582 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Foxa1P35582 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Foxa1P35582 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Foxa1P35582 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Foxa1P35582 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Foxa1P35582 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Foxa1P35582 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.73□□□□□ -0.53
Foxa1P35582 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Foxa1P35582 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Gm13492-201ENSMUST00000119772 665 ntBASIC11.73□□□□□ -0.53
Foxa1P35582 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Foxa1P35582 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Foxa1P35582 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.73□□□□□ -0.53
Foxa1P35582 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.73□□□□□ -0.53
Foxa1P35582 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Foxa1P35582 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Foxa1P35582 Gm5781-201ENSMUST00000219792 443 ntBASIC11.73□□□□□ -0.53
Foxa1P35582 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.73□□□□□ -0.53
Foxa1P35582 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms