Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.55□□□□□ -0.08
Vcam1P29533 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.55□□□□□ -0.08
Vcam1P29533 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
Vcam1P29533 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vcam1P29533 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Vcam1P29533 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vcam1P29533 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vcam1P29533 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vcam1P29533 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.54□□□□□ -0.08
Vcam1P29533 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.54□□□□□ -0.08
Vcam1P29533 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vcam1P29533 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vcam1P29533 Gm12380-201ENSMUST00000119012 544 ntBASIC14.54□□□□□ -0.08
Vcam1P29533 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.54□□□□□ -0.08
Vcam1P29533 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Vcam1P29533 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.54□□□□□ -0.08
Vcam1P29533 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Vcam1P29533 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vcam1P29533 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcam1P29533 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Vcam1P29533 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vcam1P29533 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.53□□□□□ -0.08
Vcam1P29533 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.53□□□□□ -0.08
Vcam1P29533 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Vcam1P29533 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vcam1P29533 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.53□□□□□ -0.08
Vcam1P29533 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.53□□□□□ -0.08
Vcam1P29533 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.53□□□□□ -0.08
Vcam1P29533 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.53□□□□□ -0.08
Vcam1P29533 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.53□□□□□ -0.08
Vcam1P29533 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vcam1P29533 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Vcam1P29533 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.53□□□□□ -0.08
Vcam1P29533 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.53□□□□□ -0.08
Vcam1P29533 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcam1P29533 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.52□□□□□ -0.08
Vcam1P29533 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.52□□□□□ -0.08
Vcam1P29533 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcam1P29533 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms