Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Clk1P22518 Gm11478-201ENSMUST00000117851 599 ntBASIC11.93□□□□□ -0.5
Clk1P22518 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.93□□□□□ -0.5
Clk1P22518 Gm11978-201ENSMUST00000122315 466 ntBASIC11.93□□□□□ -0.5
Clk1P22518 Gm10156-201ENSMUST00000122364 462 ntBASIC11.93□□□□□ -0.5
Clk1P22518 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.93□□□□□ -0.5
Clk1P22518 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.93□□□□□ -0.5
Clk1P22518 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.93□□□□□ -0.5
Clk1P22518 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.93□□□□□ -0.5
Clk1P22518 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.93□□□□□ -0.5
Clk1P22518 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Clk1P22518 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.93□□□□□ -0.5
Clk1P22518 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Clk1P22518 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.93□□□□□ -0.5
Clk1P22518 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.93□□□□□ -0.5
Clk1P22518 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Clk1P22518 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.93□□□□□ -0.5
Clk1P22518 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.93□□□□□ -0.5
Clk1P22518 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.92□□□□□ -0.5
Clk1P22518 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.92□□□□□ -0.5
Clk1P22518 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.92□□□□□ -0.5
Clk1P22518 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Clk1P22518 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Gm14350-201ENSMUST00000116642 640 ntBASIC11.92□□□□□ -0.5
Clk1P22518 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.92□□□□□ -0.5
Clk1P22518 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.92□□□□□ -0.5
Clk1P22518 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.92□□□□□ -0.5
Clk1P22518 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.92□□□□□ -0.5
Clk1P22518 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.92□□□□□ -0.5
Clk1P22518 Gm10012-201ENSMUST00000078252 192 ntBASIC11.92□□□□□ -0.5
Clk1P22518 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.92□□□□□ -0.5
Clk1P22518 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Clk1P22518 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Clk1P22518 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clk1P22518 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.91□□□□□ -0.5
Clk1P22518 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.91□□□□□ -0.5
Clk1P22518 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.91□□□□□ -0.5
Clk1P22518 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Clk1P22518 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.91□□□□□ -0.5
Clk1P22518 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.91□□□□□ -0.5
Clk1P22518 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Clk1P22518 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.91□□□□□ -0.5
Clk1P22518 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Clk1P22518 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Clk1P22518 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Gm27486-201ENSMUST00000184923 80 ntBASIC11.91□□□□□ -0.5
Clk1P22518 Gm7063-201ENSMUST00000186840 981 ntBASIC11.91□□□□□ -0.5
Clk1P22518 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.91□□□□□ -0.5
Clk1P22518 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Clk1P22518 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Clk1P22518 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clk1P22518 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.91□□□□□ -0.5
Clk1P22518 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.91□□□□□ -0.5
Clk1P22518 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms