Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Gm23958-201ENSMUST00000157207 105 ntBASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Gm9368-201ENSMUST00000219348 831 ntBASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf9P20334 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm14201-201ENSMUST00000117627 289 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm13369-201ENSMUST00000119442 987 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Mir7070-201ENSMUST00000183657 86 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm42627-201ENSMUST00000197347 224 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm43133-201ENSMUST00000197472 463 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm45865-201ENSMUST00000211815 945 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm10608-202ENSMUST00000213924 676 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf9P20334 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf9P20334 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms