Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.7□□□□□ -0.06
Col1a1P11087 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.7□□□□□ -0.06
Col1a1P11087 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col1a1P11087 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Gm24231-201ENSMUST00000104315 133 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col1a1P11087 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.69□□□□□ -0.06
Col1a1P11087 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm11246-201ENSMUST00000120880 345 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm6407-201ENSMUST00000176468 549 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm17831-201ENSMUST00000205579 900 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col1a1P11087 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.69□□□□□ -0.06
Col1a1P11087 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col1a1P11087 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col1a1P11087 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Matn2-206ENSMUST00000228570 2798 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm11509-201ENSMUST00000117358 325 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Gm15573-201ENSMUST00000119487 540 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.69□□□□□ -0.06
Col1a1P11087 Gm9022-201ENSMUST00000182482 992 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.69□□□□□ -0.06
Col1a1P11087 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.69□□□□□ -0.06
Col1a1P11087 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.69□□□□□ -0.06
Col1a1P11087 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Gm10288-201ENSMUST00000084614 537 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.69□□□□□ -0.06
Col1a1P11087 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col1a1P11087 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col1a1P11087 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.68□□□□□ -0.06
Col1a1P11087 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.68□□□□□ -0.06
Col1a1P11087 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.68□□□□□ -0.06
Col1a1P11087 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Col1a1P11087 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.68□□□□□ -0.06
Col1a1P11087 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col1a1P11087 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.68□□□□□ -0.06
Col1a1P11087 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.68□□□□□ -0.06
Col1a1P11087 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.68□□□□□ -0.06
Col1a1P11087 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Col1a1P11087 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col1a1P11087 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.68□□□□□ -0.06
Col1a1P11087 Mir7076-201ENSMUST00000183519 74 ntBASIC14.68□□□□□ -0.06
Col1a1P11087 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.68□□□□□ -0.06
Col1a1P11087 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col1a1P11087 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms