Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
UbbP0CG49 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.07□□□□□ -0.64
UbbP0CG49 Mir686-201ENSMUST00000102174 109 ntBASIC11.07□□□□□ -0.64
UbbP0CG49 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Gm15487-201ENSMUST00000122373 465 ntBASIC11.07□□□□□ -0.64
UbbP0CG49 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.07□□□□□ -0.64
UbbP0CG49 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.07□□□□□ -0.64
UbbP0CG49 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.07□□□□□ -0.64
UbbP0CG49 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.07□□□□□ -0.64
UbbP0CG49 Gm44124-201ENSMUST00000204159 472 ntBASIC11.07□□□□□ -0.64
UbbP0CG49 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.07□□□□□ -0.64
UbbP0CG49 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.07□□□□□ -0.64
UbbP0CG49 Gm19220-201ENSMUST00000222682 803 ntBASIC11.07□□□□□ -0.64
UbbP0CG49 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.07□□□□□ -0.64
UbbP0CG49 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
UbbP0CG49 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.07□□□□□ -0.64
UbbP0CG49 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
UbbP0CG49 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.07□□□□□ -0.64
UbbP0CG49 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.07□□□□□ -0.64
UbbP0CG49 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UbbP0CG49 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.06□□□□□ -0.64
UbbP0CG49 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
UbbP0CG49 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.06□□□□□ -0.64
UbbP0CG49 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.06□□□□□ -0.64
UbbP0CG49 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
UbbP0CG49 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
UbbP0CG49 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
UbbP0CG49 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Gm16202-201ENSMUST00000117532 544 ntBASIC11.06□□□□□ -0.64
UbbP0CG49 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.06□□□□□ -0.64
UbbP0CG49 Gm13813-201ENSMUST00000120998 787 ntBASIC11.06□□□□□ -0.64
UbbP0CG49 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.06□□□□□ -0.64
UbbP0CG49 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Gm16372-201ENSMUST00000073088 450 ntBASIC11.06□□□□□ -0.64
UbbP0CG49 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
UbbP0CG49 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.06□□□□□ -0.64
UbbP0CG49 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.06□□□□□ -0.64
UbbP0CG49 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.06□□□□□ -0.64
UbbP0CG49 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
UbbP0CG49 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UbbP0CG49 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.05□□□□□ -0.64
UbbP0CG49 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
UbbP0CG49 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.05□□□□□ -0.64
UbbP0CG49 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.05□□□□□ -0.64
UbbP0CG49 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.05□□□□□ -0.64
UbbP0CG49 Gm14719-201ENSMUST00000121891 340 ntBASIC11.05□□□□□ -0.64
UbbP0CG49 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.05□□□□□ -0.64
UbbP0CG49 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
UbbP0CG49 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Gm44397-201ENSMUST00000195950 113 ntBASIC11.05□□□□□ -0.64
UbbP0CG49 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Gm6458-201ENSMUST00000211573 635 ntBASIC11.05□□□□□ -0.64
UbbP0CG49 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.05□□□□□ -0.64
UbbP0CG49 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Itm2b-204ENSMUST00000228637 783 ntBASIC11.05□□□□□ -0.64
UbbP0CG49 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UbbP0CG49 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms