Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.46□□□□□ -0.25
TnfP06804 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TnfP06804 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TnfP06804 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TnfP06804 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
TnfP06804 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.46□□□□□ -0.25
TnfP06804 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.46□□□□□ -0.25
TnfP06804 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.46□□□□□ -0.25
TnfP06804 Gm13570-201ENSMUST00000140763 309 ntBASIC13.46□□□□□ -0.25
TnfP06804 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.46□□□□□ -0.25
TnfP06804 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.46□□□□□ -0.25
TnfP06804 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.46□□□□□ -0.25
TnfP06804 Gm44967-201ENSMUST00000207047 631 ntBASIC13.46□□□□□ -0.25
TnfP06804 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.46□□□□□ -0.25
TnfP06804 Gm13097-201ENSMUST00000210722 397 ntBASIC13.46□□□□□ -0.25
TnfP06804 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TnfP06804 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.46□□□□□ -0.26
TnfP06804 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TnfP06804 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TnfP06804 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.46□□□□□ -0.26
TnfP06804 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TnfP06804 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TnfP06804 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
TnfP06804 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.45□□□□□ -0.26
TnfP06804 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.45□□□□□ -0.26
TnfP06804 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TnfP06804 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TnfP06804 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TnfP06804 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TnfP06804 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.45□□□□□ -0.26
TnfP06804 Gm29199-201ENSMUST00000187766 775 ntBASIC13.45□□□□□ -0.26
TnfP06804 Gm38317-201ENSMUST00000195564 343 ntBASIC13.45□□□□□ -0.26
TnfP06804 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.45□□□□□ -0.26
TnfP06804 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.45□□□□□ -0.26
TnfP06804 Gm39404-201ENSMUST00000216350 313 ntBASIC13.45□□□□□ -0.26
TnfP06804 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.45□□□□□ -0.26
TnfP06804 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Mir433-201ENSMUST00000093564 124 ntBASIC13.45□□□□□ -0.26
TnfP06804 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TnfP06804 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
TnfP06804 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TnfP06804 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TnfP06804 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TnfP06804 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.44□□□□□ -0.26
TnfP06804 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TnfP06804 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TnfP06804 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
TnfP06804 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TnfP06804 Gm14109-201ENSMUST00000118814 309 ntBASIC13.44□□□□□ -0.26
TnfP06804 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.44□□□□□ -0.26
TnfP06804 Gm15276-201ENSMUST00000145953 498 ntBASIC13.44□□□□□ -0.26
TnfP06804 Rmrp-201ENSMUST00000157463 271 ntBASIC13.44□□□□□ -0.26
TnfP06804 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TnfP06804 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.44□□□□□ -0.26
TnfP06804 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.44□□□□□ -0.26
TnfP06804 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TnfP06804 Gm10076-201ENSMUST00000073238 384 ntBASIC13.44□□□□□ -0.26
TnfP06804 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms