Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hoxa4P06798 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hoxa4P06798 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxa4P06798 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Hoxa4P06798 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Hoxa4P06798 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa4P06798 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Hoxa4P06798 Gm11597-201ENSMUST00000121423 964 ntBASIC12.5□□□□□ -0.41
Hoxa4P06798 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.5□□□□□ -0.41
Hoxa4P06798 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.5□□□□□ -0.41
Hoxa4P06798 Gm2546-201ENSMUST00000182630 991 ntBASIC12.5□□□□□ -0.41
Hoxa4P06798 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxa4P06798 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.5□□□□□ -0.41
Hoxa4P06798 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.5□□□□□ -0.41
Hoxa4P06798 Gm5950-201ENSMUST00000213337 772 ntBASIC12.5□□□□□ -0.41
Hoxa4P06798 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.5□□□□□ -0.41
Hoxa4P06798 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hoxa4P06798 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxa4P06798 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxa4P06798 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxa4P06798 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa4P06798 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxa4P06798 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.49□□□□□ -0.41
Hoxa4P06798 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gm13875-201ENSMUST00000120162 282 ntBASIC12.49□□□□□ -0.41
Hoxa4P06798 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gm18304-201ENSMUST00000189162 546 ntBASIC12.49□□□□□ -0.41
Hoxa4P06798 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gm3961-201ENSMUST00000204425 994 ntBASIC12.49□□□□□ -0.41
Hoxa4P06798 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxa4P06798 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.49□□□□□ -0.41
Hoxa4P06798 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxa4P06798 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa4P06798 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms