Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.12□□□□□ -0.31
PrnpP04925 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PrnpP04925 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PrnpP04925 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PrnpP04925 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.12□□□□□ -0.31
PrnpP04925 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PrnpP04925 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.12□□□□□ -0.31
PrnpP04925 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.12□□□□□ -0.31
PrnpP04925 Gm42937-201ENSMUST00000197360 752 ntBASIC13.12□□□□□ -0.31
PrnpP04925 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PrnpP04925 Gm29787-201ENSMUST00000222129 849 ntBASIC13.12□□□□□ -0.31
PrnpP04925 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.12□□□□□ -0.31
PrnpP04925 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.12□□□□□ -0.31
PrnpP04925 Spcs1-203ENSMUST00000226374 592 ntBASIC13.12□□□□□ -0.31
PrnpP04925 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PrnpP04925 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.12□□□□□ -0.31
PrnpP04925 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PrnpP04925 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrnpP04925 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PrnpP04925 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PrnpP04925 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
PrnpP04925 Gm9062-201ENSMUST00000117712 727 ntBASIC13.11□□□□□ -0.31
PrnpP04925 Gm13611-201ENSMUST00000118269 318 ntBASIC13.11□□□□□ -0.31
PrnpP04925 Gm12380-201ENSMUST00000119012 544 ntBASIC13.11□□□□□ -0.31
PrnpP04925 Mir1943-201ENSMUST00000158276 73 ntBASIC13.11□□□□□ -0.31
PrnpP04925 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.11□□□□□ -0.31
PrnpP04925 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PrnpP04925 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
PrnpP04925 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
PrnpP04925 Gm28071-201ENSMUST00000190355 478 ntBASIC13.11□□□□□ -0.31
PrnpP04925 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Gm9996-201ENSMUST00000070359 913 ntBASIC13.11□□□□□ -0.31
PrnpP04925 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PrnpP04925 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.11□□□□□ -0.31
PrnpP04925 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
PrnpP04925 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
PrnpP04925 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.11□□□□□ -0.31
PrnpP04925 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
PrnpP04925 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.11□□□□□ -0.31
PrnpP04925 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PrnpP04925 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
PrnpP04925 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.11□□□□□ -0.31
PrnpP04925 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrnpP04925 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
PrnpP04925 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
PrnpP04925 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms