Protein–RNA interactions for Protein: P04230

H2-Eb1, H-2 class II histocompatibility antigen, E-B beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-Eb1P04230 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.59□□□□□ -0.39
H2-Eb1P04230 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.59□□□□□ -0.39
H2-Eb1P04230 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2-Eb1P04230 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
H2-Eb1P04230 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2-Eb1P04230 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2-Eb1P04230 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.58□□□□□ -0.4
H2-Eb1P04230 Gm16479-201ENSMUST00000121706 932 ntBASIC12.58□□□□□ -0.4
H2-Eb1P04230 Gm14760-201ENSMUST00000121831 999 ntBASIC12.58□□□□□ -0.4
H2-Eb1P04230 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Gm27390-201ENSMUST00000184516 176 ntBASIC12.58□□□□□ -0.4
H2-Eb1P04230 Gm28911-201ENSMUST00000188837 117 ntBASIC12.58□□□□□ -0.4
H2-Eb1P04230 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Gm7287-201ENSMUST00000205267 602 ntBASIC12.58□□□□□ -0.4
H2-Eb1P04230 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.58□□□□□ -0.4
H2-Eb1P04230 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.58□□□□□ -0.4
H2-Eb1P04230 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.58□□□□□ -0.4
H2-Eb1P04230 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2-Eb1P04230 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.57□□□□□ -0.4
H2-Eb1P04230 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.57□□□□□ -0.4
H2-Eb1P04230 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2-Eb1P04230 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.57□□□□□ -0.4
H2-Eb1P04230 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.57□□□□□ -0.4
H2-Eb1P04230 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.57□□□□□ -0.4
H2-Eb1P04230 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.57□□□□□ -0.4
H2-Eb1P04230 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.57□□□□□ -0.4
H2-Eb1P04230 Gm37042-201ENSMUST00000193816 581 ntBASIC12.57□□□□□ -0.4
H2-Eb1P04230 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms