Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Igh-VJ558P01758 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igh-VJ558P01758 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.96□□□□□ -0.65
Igh-VJ558P01758 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gm13492-201ENSMUST00000119772 665 ntBASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gm11591-201ENSMUST00000120063 702 ntBASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gm8602-201ENSMUST00000184045 607 ntBASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gm19184-201ENSMUST00000196798 928 ntBASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gm6266-201ENSMUST00000203844 806 ntBASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igh-VJ558P01758 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igh-VJ558P01758 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Gm4984-201ENSMUST00000115987 360 ntBASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igh-VJ558P01758 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Igh-VJ558P01758 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms