Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ClppO88696 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.48□□□□□ -0.41
ClppO88696 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ClppO88696 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ClppO88696 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Gm11793-201ENSMUST00000120433 981 ntBASIC12.48□□□□□ -0.41
ClppO88696 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.48□□□□□ -0.41
ClppO88696 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ClppO88696 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.48□□□□□ -0.41
ClppO88696 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.48□□□□□ -0.41
ClppO88696 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.48□□□□□ -0.41
ClppO88696 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ClppO88696 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.48□□□□□ -0.41
ClppO88696 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ClppO88696 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ClppO88696 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.48□□□□□ -0.41
ClppO88696 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClppO88696 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
ClppO88696 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.47□□□□□ -0.41
ClppO88696 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ClppO88696 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
ClppO88696 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ClppO88696 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.47□□□□□ -0.41
ClppO88696 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.47□□□□□ -0.41
ClppO88696 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.47□□□□□ -0.41
ClppO88696 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.47□□□□□ -0.41
ClppO88696 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.47□□□□□ -0.41
ClppO88696 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.47□□□□□ -0.41
ClppO88696 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
ClppO88696 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.47□□□□□ -0.41
ClppO88696 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Gm25261-201ENSMUST00000157416 134 ntBASIC12.47□□□□□ -0.41
ClppO88696 Gm27501-201ENSMUST00000183599 107 ntBASIC12.47□□□□□ -0.41
ClppO88696 Gm4768-201ENSMUST00000206199 686 ntBASIC12.47□□□□□ -0.41
ClppO88696 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.47□□□□□ -0.41
ClppO88696 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.47□□□□□ -0.41
ClppO88696 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
ClppO88696 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.47□□□□□ -0.41
ClppO88696 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.47□□□□□ -0.41
ClppO88696 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.47□□□□□ -0.41
ClppO88696 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.47□□□□□ -0.41
ClppO88696 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClppO88696 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ClppO88696 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 Gm14723-201ENSMUST00000118686 215 ntBASIC12.46□□□□□ -0.41
ClppO88696 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClppO88696 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 148.3 ms