Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.58□□□□□ -0.39
Pdlim1O70400 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Pdlim1O70400 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim1O70400 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim1O70400 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim1O70400 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim1O70400 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Pdlim1O70400 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.58□□□□□ -0.4
Pdlim1O70400 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.58□□□□□ -0.4
Pdlim1O70400 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Gm13392-201ENSMUST00000117708 150 ntBASIC12.58□□□□□ -0.4
Pdlim1O70400 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.58□□□□□ -0.4
Pdlim1O70400 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdlim1O70400 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Daam2-202ENSMUST00000224595 1926 ntBASIC12.58□□□□□ -0.4
Pdlim1O70400 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.58□□□□□ -0.4
Pdlim1O70400 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim1O70400 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim1O70400 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.57□□□□□ -0.4
Pdlim1O70400 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pdlim1O70400 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.57□□□□□ -0.4
Pdlim1O70400 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Pdlim1O70400 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pdlim1O70400 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.57□□□□□ -0.4
Pdlim1O70400 Gm45880-201ENSMUST00000213041 853 ntBASIC12.57□□□□□ -0.4
Pdlim1O70400 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.57□□□□□ -0.4
Pdlim1O70400 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pdlim1O70400 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pdlim1O70400 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pdlim1O70400 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pdlim1O70400 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pdlim1O70400 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.57□□□□□ -0.4
Pdlim1O70400 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pdlim1O70400 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim1O70400 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.56□□□□□ -0.4
Pdlim1O70400 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms