Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Alx3O70137 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Alx3O70137 Gm16215-201ENSMUST00000161990 637 ntBASIC11.72□□□□□ -0.53
Alx3O70137 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Gm44146-201ENSMUST00000203508 816 ntBASIC11.72□□□□□ -0.53
Alx3O70137 Gm6312-201ENSMUST00000204060 1194 ntBASIC11.72□□□□□ -0.53
Alx3O70137 Gm18307-201ENSMUST00000206864 949 ntBASIC11.72□□□□□ -0.53
Alx3O70137 Gm34272-201ENSMUST00000208886 253 ntBASIC11.72□□□□□ -0.53
Alx3O70137 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.72□□□□□ -0.53
Alx3O70137 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.72□□□□□ -0.53
Alx3O70137 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.72□□□□□ -0.53
Alx3O70137 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Alx3O70137 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.72□□□□□ -0.53
Alx3O70137 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.71□□□□□ -0.53
Alx3O70137 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.71□□□□□ -0.53
Alx3O70137 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Alx3O70137 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Alx3O70137 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Gm12341-201ENSMUST00000119724 503 ntBASIC11.71□□□□□ -0.53
Alx3O70137 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.71□□□□□ -0.53
Alx3O70137 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Alx3O70137 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.71□□□□□ -0.53
Alx3O70137 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Alx3O70137 Gm18944-201ENSMUST00000207672 643 ntBASIC11.71□□□□□ -0.53
Alx3O70137 CT009711.2-202ENSMUST00000224538 973 ntBASIC11.71□□□□□ -0.53
Alx3O70137 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.71□□□□□ -0.53
Alx3O70137 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.71□□□□□ -0.53
Alx3O70137 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.71□□□□□ -0.53
Alx3O70137 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Alx3O70137 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx3O70137 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx3O70137 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx3O70137 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx3O70137 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx3O70137 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx3O70137 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Alx3O70137 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Alx3O70137 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Alx3O70137 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.7□□□□□ -0.54
Alx3O70137 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.7□□□□□ -0.54
Alx3O70137 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Alx3O70137 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Alx3O70137 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.7□□□□□ -0.54
Alx3O70137 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.7□□□□□ -0.54
Alx3O70137 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.7□□□□□ -0.54
Alx3O70137 Gm13689-201ENSMUST00000119360 685 ntBASIC11.7□□□□□ -0.54
Alx3O70137 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.7□□□□□ -0.54
Alx3O70137 Gm11978-201ENSMUST00000122315 466 ntBASIC11.7□□□□□ -0.54
Alx3O70137 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.7□□□□□ -0.54
Alx3O70137 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.7□□□□□ -0.54
Alx3O70137 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.7□□□□□ -0.54
Alx3O70137 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms