Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.81□□□□□ -0.52
BckdkO55028 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.81□□□□□ -0.52
BckdkO55028 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
BckdkO55028 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.8□□□□□ -0.52
BckdkO55028 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.8□□□□□ -0.52
BckdkO55028 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
BckdkO55028 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
BckdkO55028 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.8□□□□□ -0.52
BckdkO55028 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Mir1247-201ENSMUST00000116706 82 ntBASIC11.8□□□□□ -0.52
BckdkO55028 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.8□□□□□ -0.52
BckdkO55028 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.8□□□□□ -0.52
BckdkO55028 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
BckdkO55028 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Gm37008-201ENSMUST00000195712 319 ntBASIC11.8□□□□□ -0.52
BckdkO55028 Gm42627-201ENSMUST00000197347 224 ntBASIC11.8□□□□□ -0.52
BckdkO55028 Gm43179-201ENSMUST00000198797 275 ntBASIC11.8□□□□□ -0.52
BckdkO55028 Gm19931-201ENSMUST00000198920 368 ntBASIC11.8□□□□□ -0.52
BckdkO55028 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.8□□□□□ -0.52
BckdkO55028 Gm18054-201ENSMUST00000207539 555 ntBASIC11.8□□□□□ -0.52
BckdkO55028 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.8□□□□□ -0.52
BckdkO55028 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.8□□□□□ -0.52
BckdkO55028 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.8□□□□□ -0.52
BckdkO55028 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
BckdkO55028 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.8□□□□□ -0.52
BckdkO55028 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
BckdkO55028 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
BckdkO55028 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
BckdkO55028 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
BckdkO55028 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
BckdkO55028 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.79□□□□□ -0.52
BckdkO55028 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
BckdkO55028 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
BckdkO55028 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.79□□□□□ -0.52
BckdkO55028 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.79□□□□□ -0.52
BckdkO55028 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.79□□□□□ -0.52
BckdkO55028 Gm38002-201ENSMUST00000193255 180 ntBASIC11.79□□□□□ -0.52
BckdkO55028 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
BckdkO55028 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
BckdkO55028 Olfr582-201ENSMUST00000098212 960 ntBASIC11.79□□□□□ -0.52
BckdkO55028 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
BckdkO55028 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
BckdkO55028 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.79□□□□□ -0.52
BckdkO55028 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.79□□□□□ -0.52
BckdkO55028 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.79□□□□□ -0.52
BckdkO55028 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
BckdkO55028 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.79□□□□□ -0.52
BckdkO55028 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.78□□□□□ -0.52
BckdkO55028 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
BckdkO55028 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms