Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.41□□□□□ -0.42
Npc1O35604 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.41□□□□□ -0.42
Npc1O35604 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Npc1O35604 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.41□□□□□ -0.42
Npc1O35604 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.41□□□□□ -0.42
Npc1O35604 Gm7809-201ENSMUST00000153199 742 ntBASIC12.41□□□□□ -0.42
Npc1O35604 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.41□□□□□ -0.42
Npc1O35604 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.41□□□□□ -0.42
Npc1O35604 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Gm6007-201ENSMUST00000208170 823 ntBASIC12.41□□□□□ -0.42
Npc1O35604 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.41□□□□□ -0.42
Npc1O35604 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.41□□□□□ -0.42
Npc1O35604 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.41□□□□□ -0.42
Npc1O35604 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.41□□□□□ -0.42
Npc1O35604 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.41□□□□□ -0.42
Npc1O35604 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Npc1O35604 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Npc1O35604 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Npc1O35604 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npc1O35604 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.4□□□□□ -0.42
Npc1O35604 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.4□□□□□ -0.42
Npc1O35604 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Npc1O35604 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Npc1O35604 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Npc1O35604 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.4□□□□□ -0.42
Npc1O35604 Gm6023-201ENSMUST00000118217 606 ntBASIC12.4□□□□□ -0.42
Npc1O35604 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.4□□□□□ -0.42
Npc1O35604 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.4□□□□□ -0.42
Npc1O35604 Gm23363-201ENSMUST00000175024 79 ntBASIC12.4□□□□□ -0.42
Npc1O35604 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.4□□□□□ -0.42
Npc1O35604 Gm3890-201ENSMUST00000182416 207 ntBASIC12.4□□□□□ -0.42
Npc1O35604 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.4□□□□□ -0.42
Npc1O35604 Gm38266-201ENSMUST00000194931 421 ntBASIC12.4□□□□□ -0.42
Npc1O35604 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Npc1O35604 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Npc1O35604 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npc1O35604 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Npc1O35604 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Npc1O35604 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.4□□□□□ -0.43
Npc1O35604 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Npc1O35604 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Npc1O35604 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Npc1O35604 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Npc1O35604 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.4□□□□□ -0.43
Npc1O35604 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Npc1O35604 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Npc1O35604 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Npc1O35604 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.39□□□□□ -0.43
Npc1O35604 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms