Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptch2O35595 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Ptch2O35595 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ptch2O35595 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ptch2O35595 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.04□□□□□ -0.32
Ptch2O35595 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.04□□□□□ -0.32
Ptch2O35595 Gm2260-201ENSMUST00000184965 657 ntBASIC13.04□□□□□ -0.32
Ptch2O35595 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptch2O35595 Gm8712-201ENSMUST00000221090 701 ntBASIC13.04□□□□□ -0.32
Ptch2O35595 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.04□□□□□ -0.32
Ptch2O35595 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ptch2O35595 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.04□□□□□ -0.32
Ptch2O35595 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptch2O35595 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptch2O35595 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.03□□□□□ -0.32
Ptch2O35595 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.03□□□□□ -0.32
Ptch2O35595 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ptch2O35595 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.03□□□□□ -0.32
Ptch2O35595 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.03□□□□□ -0.32
Ptch2O35595 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.03□□□□□ -0.32
Ptch2O35595 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Ptch2O35595 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.03□□□□□ -0.32
Ptch2O35595 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.03□□□□□ -0.32
Ptch2O35595 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ptch2O35595 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptch2O35595 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.02□□□□□ -0.32
Ptch2O35595 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.02□□□□□ -0.32
Ptch2O35595 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ptch2O35595 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.02□□□□□ -0.32
Ptch2O35595 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ptch2O35595 Gm13736-201ENSMUST00000119272 253 ntBASIC13.02□□□□□ -0.33
Ptch2O35595 Gm14208-201ENSMUST00000119645 678 ntBASIC13.02□□□□□ -0.33
Ptch2O35595 Gm13492-201ENSMUST00000119772 665 ntBASIC13.02□□□□□ -0.33
Ptch2O35595 Gm12291-201ENSMUST00000121627 311 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms