Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Gm28323-201ENSMUST00000186817 2499 ntBASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Gm17435-202ENSMUST00000212699 1998 ntBASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Gm7278-201ENSMUST00000119836 1401 ntBASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Gm15725-201ENSMUST00000119947 1090 ntBASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Gm5863-201ENSMUST00000121760 1008 ntBASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Gm5100-201ENSMUST00000195631 589 ntBASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Gm43186-201ENSMUST00000198130 824 ntBASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Gm2965-201ENSMUST00000198365 343 ntBASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubgcp6G5E8P0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Gm9361-201ENSMUST00000198695 1507 ntBASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Gm37299-201ENSMUST00000193951 826 ntBASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Gm42779-201ENSMUST00000198807 406 ntBASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Gm19009-201ENSMUST00000223072 823 ntBASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tubgcp6G5E8P0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Gm27194-201ENSMUST00000175753 2936 ntBASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Gm12857-201ENSMUST00000117678 592 ntBASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Rprl1-201ENSMUST00000158050 327 ntBASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Gm22877-201ENSMUST00000175451 105 ntBASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 AC151275.1-201ENSMUST00000224870 585 ntBASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Gm12516-201ENSMUST00000120819 385 ntBASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubgcp6G5E8P0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubgcp6G5E8P0 Gm12579-201ENSMUST00000118040 783 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms