Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Gm17391-201ENSMUST00000171036 126 ntBASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 AC129219.2-201ENSMUST00000224324 701 ntBASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Gm45266-201ENSMUST00000210111 2173 ntBASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcf11G3X9Z4 Rprl1-201ENSMUST00000158050 327 ntBASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Mir7677-201ENSMUST00000184226 67 ntBASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Gm43916-201ENSMUST00000205062 967 ntBASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Gm4797-201ENSMUST00000219075 1283 ntBASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 AC154849.4-201ENSMUST00000224868 365 ntBASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Gm10179-201ENSMUST00000086233 688 ntBASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Gm5847-201ENSMUST00000178959 1595 ntBASIC18.89■□□□□ 0.62
Pcf11G3X9Z4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Gm12579-201ENSMUST00000118040 783 ntBASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Gm8566-201ENSMUST00000120174 465 ntBASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Gm18711-201ENSMUST00000199341 750 ntBASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcf11G3X9Z4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Gm13611-201ENSMUST00000118269 318 ntBASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Gm12208-201ENSMUST00000122004 163 ntBASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Gm4157-201ENSMUST00000211647 679 ntBASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 D9Wsu149-201ENSMUST00000214169 594 ntBASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcf11G3X9Z4 Gm2420-201ENSMUST00000119864 2149 ntBASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Gm13461-201ENSMUST00000120980 662 ntBASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Gm15432-201ENSMUST00000121106 195 ntBASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Gm8956-201ENSMUST00000203939 825 ntBASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Gm44551-201ENSMUST00000208804 171 ntBASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcf11G3X9Z4 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms