Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Gm37042-201ENSMUST00000193816 581 ntBASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Daam2-202ENSMUST00000224595 1926 ntBASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Gm14760-201ENSMUST00000121831 999 ntBASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Mir1894-201ENSMUST00000122802 81 ntBASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Gm6244-201ENSMUST00000178732 841 ntBASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh9F8VPK8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Snord83b-201ENSMUST00000104546 94 ntBASIC13□□□□□ -0.33
Pcdh9F8VPK8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Gm11803-201ENSMUST00000119966 444 ntBASIC13□□□□□ -0.33
Pcdh9F8VPK8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Gm27892-201ENSMUST00000185017 106 ntBASIC13□□□□□ -0.33
Pcdh9F8VPK8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Gm17794-201ENSMUST00000220252 955 ntBASIC13□□□□□ -0.33
Pcdh9F8VPK8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Rubie-203ENSMUST00000227803 2430 ntBASIC13□□□□□ -0.33
Pcdh9F8VPK8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms