Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.21■□□□□ 0.03
Ube4aE9Q735 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.21■□□□□ 0.03
Ube4aE9Q735 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Gm37986-201ENSMUST00000193285 383 ntBASIC15.21■□□□□ 0.03
Ube4aE9Q735 Gm19994-201ENSMUST00000217086 586 ntBASIC15.21■□□□□ 0.03
Ube4aE9Q735 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Gm9996-201ENSMUST00000070359 913 ntBASIC15.21■□□□□ 0.03
Ube4aE9Q735 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4aE9Q735 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ube4aE9Q735 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ube4aE9Q735 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Ube4aE9Q735 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ube4aE9Q735 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ube4aE9Q735 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Ube4aE9Q735 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Ube4aE9Q735 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.2■□□□□ 0.02
Ube4aE9Q735 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC15.2■□□□□ 0.02
Ube4aE9Q735 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Gm23119-201ENSMUST00000158610 140 ntBASIC15.2■□□□□ 0.02
Ube4aE9Q735 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Gm17040-202ENSMUST00000170597 889 ntBASIC15.2■□□□□ 0.02
Ube4aE9Q735 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.2■□□□□ 0.02
Ube4aE9Q735 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.2■□□□□ 0.02
Ube4aE9Q735 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4aE9Q735 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Gm12266-201ENSMUST00000120311 962 ntBASIC15.19■□□□□ 0.02
Ube4aE9Q735 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Gm34767-201ENSMUST00000191813 1062 ntBASIC15.19■□□□□ 0.02
Ube4aE9Q735 AY036118-201ENSMUST00000200021 923 ntBASIC15.19■□□□□ 0.02
Ube4aE9Q735 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.19■□□□□ 0.02
Ube4aE9Q735 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.19■□□□□ 0.02
Ube4aE9Q735 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.19■□□□□ 0.02
Ube4aE9Q735 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Matn2-206ENSMUST00000228570 2798 ntBASIC15.19■□□□□ 0.02
Ube4aE9Q735 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms