Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Gm26035-201ENSMUST00000083065 308 ntBASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Gm9022-201ENSMUST00000182482 992 ntBASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb9E9Q5G2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Gm23270-201ENSMUST00000104055 131 ntBASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Gm14999-201ENSMUST00000121039 624 ntBASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Gm13570-201ENSMUST00000140763 309 ntBASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Gm18304-201ENSMUST00000189162 546 ntBASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Gm10076-201ENSMUST00000073238 384 ntBASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb9E9Q5G2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms