Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm15703-201ENSMUST00000120250 880 ntBASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm8062-201ENSMUST00000139696 444 ntBASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm5781-201ENSMUST00000219792 443 ntBASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Daam2-202ENSMUST00000224595 1926 ntBASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cpsf4lE9Q2N0 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Gm11964-201ENSMUST00000120982 444 ntBASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Gm19309-201ENSMUST00000218295 205 ntBASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Gm26035-201ENSMUST00000083065 308 ntBASIC10.74□□□□□ -0.69
Cpsf4lE9Q2N0 Gm22058-201ENSMUST00000083393 310 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms