Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clca3bE9PUL3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clca3bE9PUL3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clca3bE9PUL3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clca3bE9PUL3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clca3bE9PUL3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clca3bE9PUL3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Gm12314-201ENSMUST00000118104 538 ntBASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Gm14726-201ENSMUST00000120623 896 ntBASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clca3bE9PUL3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Clca3bE9PUL3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Rmrp-201ENSMUST00000157463 271 ntBASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Gm37201-201ENSMUST00000191845 523 ntBASIC13.64□□□□□ -0.23
Clca3bE9PUL3 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Gm26035-201ENSMUST00000083065 308 ntBASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clca3bE9PUL3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms