Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Gm23949-201ENSMUST00000104027 127 ntBASIC11.38□□□□□ -0.59
Shank1D3YZU1 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Gm12291-201ENSMUST00000121627 311 ntBASIC11.38□□□□□ -0.59
Shank1D3YZU1 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Mir6958-201ENSMUST00000184207 73 ntBASIC11.38□□□□□ -0.59
Shank1D3YZU1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.38□□□□□ -0.59
Shank1D3YZU1 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Gm7600-201ENSMUST00000209657 785 ntBASIC11.38□□□□□ -0.59
Shank1D3YZU1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.38□□□□□ -0.59
Shank1D3YZU1 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.38□□□□□ -0.59
Shank1D3YZU1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shank1D3YZU1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.37□□□□□ -0.59
Shank1D3YZU1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.37□□□□□ -0.59
Shank1D3YZU1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms