Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm23153-201ENSMUST00000175323 313 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm21092-201ENSMUST00000178995 955 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm4310-201ENSMUST00000177847 889 ntBASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm29155-201ENSMUST00000185910 269 ntBASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm6867-201ENSMUST00000219165 425 ntBASIC12.79□□□□□ -0.36
Col4a6B1AVK5 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a6B1AVK5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Gm15352-201ENSMUST00000118696 270 ntBASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms