Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Chd3B1AR17 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.44□□□□□ -0.42
Chd3B1AR17 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.44□□□□□ -0.42
Chd3B1AR17 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.44□□□□□ -0.42
Chd3B1AR17 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Chd3B1AR17 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chd3B1AR17 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.43□□□□□ -0.42
Chd3B1AR17 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Chd3B1AR17 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Chd3B1AR17 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chd3B1AR17 Gm12314-201ENSMUST00000118104 538 ntBASIC12.43□□□□□ -0.42
Chd3B1AR17 Gm13315-201ENSMUST00000120376 991 ntBASIC12.43□□□□□ -0.42
Chd3B1AR17 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.43□□□□□ -0.42
Chd3B1AR17 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Gm2546-201ENSMUST00000182630 991 ntBASIC12.43□□□□□ -0.42
Chd3B1AR17 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.43□□□□□ -0.42
Chd3B1AR17 Mir7070-201ENSMUST00000183657 86 ntBASIC12.43□□□□□ -0.42
Chd3B1AR17 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.43□□□□□ -0.42
Chd3B1AR17 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.43□□□□□ -0.42
Chd3B1AR17 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chd3B1AR17 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.43□□□□□ -0.42
Chd3B1AR17 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Chd3B1AR17 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.43□□□□□ -0.42
Chd3B1AR17 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd3B1AR17 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chd3B1AR17 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.42□□□□□ -0.42
Chd3B1AR17 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Chd3B1AR17 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.42□□□□□ -0.42
Chd3B1AR17 Gm13875-201ENSMUST00000120162 282 ntBASIC12.42□□□□□ -0.42
Chd3B1AR17 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Gm45224-201ENSMUST00000208203 414 ntBASIC12.42□□□□□ -0.42
Chd3B1AR17 Gm19994-201ENSMUST00000217086 586 ntBASIC12.42□□□□□ -0.42
Chd3B1AR17 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.42□□□□□ -0.42
Chd3B1AR17 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chd3B1AR17 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chd3B1AR17 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chd3B1AR17 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.42□□□□□ -0.42
Chd3B1AR17 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.42□□□□□ -0.42
Chd3B1AR17 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.42□□□□□ -0.42
Chd3B1AR17 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd3B1AR17 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms