Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Gm12566-201ENSMUST00000121479 359 ntBASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Gm23699-201ENSMUST00000158835 135 ntBASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Gm27627-201ENSMUST00000183644 150 ntBASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Nsd1-205ENSMUST00000224693 852 ntBASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3aA2ASI5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Mir6979-201ENSMUST00000183927 56 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Gm43947-201ENSMUST00000203019 959 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Gm10051-201ENSMUST00000145209 414 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 AU022133-201ENSMUST00000200601 873 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3aA2ASI5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Gm18730-201ENSMUST00000218038 343 ntBASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn3aA2ASI5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms