Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc112A0AUP1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc112A0AUP1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc112A0AUP1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccdc112A0AUP1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc112A0AUP1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc112A0AUP1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Gm22121-201ENSMUST00000175148 54 ntBASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Gm5866-201ENSMUST00000177881 973 ntBASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Gm37922-201ENSMUST00000195596 455 ntBASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc112A0AUP1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Gm23363-201ENSMUST00000175024 79 ntBASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Auts2-212ENSMUST00000178555 309 ntBASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Gm8099-201ENSMUST00000200510 742 ntBASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Daam2-202ENSMUST00000224595 1926 ntBASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc112A0AUP1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms