Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.49□□□□□ -0.57
Smim17A0A504 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Smim17A0A504 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Smim17A0A504 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Smim17A0A504 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Smim17A0A504 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smim17A0A504 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smim17A0A504 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.48□□□□□ -0.57
Smim17A0A504 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.48□□□□□ -0.57
Smim17A0A504 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.48□□□□□ -0.57
Smim17A0A504 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.48□□□□□ -0.57
Smim17A0A504 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.48□□□□□ -0.57
Smim17A0A504 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.48□□□□□ -0.57
Smim17A0A504 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.48□□□□□ -0.57
Smim17A0A504 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Smim17A0A504 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim17A0A504 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.47□□□□□ -0.57
Smim17A0A504 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.47□□□□□ -0.57
Smim17A0A504 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smim17A0A504 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smim17A0A504 Gm33320-201ENSMUST00000192232 530 ntBASIC11.47□□□□□ -0.57
Smim17A0A504 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smim17A0A504 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.47□□□□□ -0.57
Smim17A0A504 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.47□□□□□ -0.57
Smim17A0A504 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.47□□□□□ -0.57
Smim17A0A504 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smim17A0A504 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smim17A0A504 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim17A0A504 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.47□□□□□ -0.57
Smim17A0A504 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.46□□□□□ -0.57
Smim17A0A504 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.46□□□□□ -0.57
Smim17A0A504 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Smim17A0A504 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim17A0A504 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms