Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm10275-202ENSMUST00000168697 495 ntBASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm19184-201ENSMUST00000196798 928 ntBASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm45776-201ENSMUST00000212366 1522 ntBASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 AC125350.1-201ENSMUST00000225115 903 ntBASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm10275-201ENSMUST00000092620 635 ntBASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm38292-201ENSMUST00000192646 3045 ntBASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Gm43273-201ENSMUST00000199649 2594 ntBASIC6.12□□□□□ -1.43
Gm3880A0A1B0GSB3 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Gm3880A0A1B0GSB3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms