Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trbv29A0A0G2LB96 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trbv29A0A0G2LB96 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.55□□□□□ -0.72
Trbv29A0A0G2LB96 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gm27390-201ENSMUST00000184516 176 ntBASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gm20949-201ENSMUST00000206478 952 ntBASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trbv29A0A0G2LB96 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trbv29A0A0G2LB96 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trbv29A0A0G2LB96 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Trbv29A0A0G2LB96 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trbv29A0A0G2LB96 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Trbv29A0A0G2LB96 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms