Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 AC131586.3-201ENSMUST00000228355 1367 ntBASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Mzt1-203ENSMUST00000227948 952 ntBASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav7n-4A0A075B620 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.88
Trav7n-4A0A075B620 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gm13813-201ENSMUST00000120998 787 ntBASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gm18889-201ENSMUST00000174284 929 ntBASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 AC155252.2-201ENSMUST00000226946 680 ntBASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gm5161-201ENSMUST00000075243 853 ntBASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 1395.5 ms