Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.72□□□□□ -0.37
H2afb2S4R1M3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gm43818-201ENSMUST00000200605 466 ntBASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gm32025-201ENSMUST00000217960 307 ntBASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gm10268-201ENSMUST00000085340 555 ntBASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb2S4R1M3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Gm12390-201ENSMUST00000117897 397 ntBASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Gm7063-201ENSMUST00000186840 981 ntBASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb2S4R1M3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
H2afb2S4R1M3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
H2afb2S4R1M3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
H2afb2S4R1M3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H2afb2S4R1M3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H2afb2S4R1M3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H2afb2S4R1M3 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.71□□□□□ -0.38
H2afb2S4R1M3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
H2afb2S4R1M3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms